LaTcOm: a web server for visualizing rare codon clusters in coding sequences

OPTIMIZER: a web server for optimizing the codon usage of DNA sequences

OPTIMIZER is an on-line application that optimizes the codon usage of a gene to increase its expression level. Three methods of optimization are available: the 'one amino acid-one codon' method, a guided random method based on a Monte Carlo algorithm, and a new method designed to maximize the optimization with the fewest changes in the query sequence. One of the main features of OPTIMIZER is th...

Neighbor Replication Technique for Web Server Clusters

With the ever increasing applications in WWW such as distance learning education and e-commerce, the need for the reliability of the non-stop cluster web server is likely to increase. Thus, providing reliable and efficient services are the primary goals in designing a web server cluster (WSC) due to the constraints in the eventual failure of hardware/software components. In order to provide rel...

Standard ML on the Web server : Visualizing

SPARCS: a web server to analyze (un)structured regions in coding RNA sequences

More than a simple carrier of the genetic information, messenger RNA (mRNA) coding regions can also harbor functional elements that evolved to control different post-transcriptional processes, such as mRNA splicing, localization and translation. Functional elements in RNA molecules are often encoded by secondary structure elements. In this aticle, we introduce Structural Profile Assignment of R...

ODORactor: a web server for deciphering olfactory coding

SUMMARY ODORactor is an open access web server aimed at providing a platform for identifying odorant receptors (ORs) for small molecules and for browsing existing OR-ligand pairs. It enables the prediction of ORs from the molecular structures of arbitrary chemicals by integrating two individual functionalities: odorant verification and OR recognition. The prediction of the ORs for several odora...